WEB-based GEne SeT AnaLysis Toolkit
 
Translating gene lists into biological insights...
 


User data and parameters: User data: textAreaUpload.txt, Organism: hsapiens, Id Type: ensembl_gene_stable_id, Ref Set: entrezgene, Significance Level: Top10, Statistics Test: Hypergeometric, MTC: BH, Minimum: 2

The results for each enriched gene sets are listed in this table.
For each gene set, the first row lists database name, gene set name , and corresponding gene set ID. The second row lists the following statistics:
Finally, genes in the gene set are listed. For each gene, the table lists the user uploaded ID and value (optional), Entrez ID, Ensembl Gene Stable ID, Gene symbol, and description. Ensembl Gene Stable ID and Entrez Gene ID are linked to the Ensembl and Entrez Gene databases, respectively.

Database:Transcription Target       Name:hsa_V$CHOP_01       ID:DB_ID:2022
C=235; O=2; E=0.17; R=11.84; rawP=0.0124; adjP=0.0334
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000122376 NA FAM35A family with sequence similarity 35, member A 54537 ENSG00000122376
2  ENSG00000170837 NA GPR27 G protein-coupled receptor 27 2850 ENSG00000170837


Database:Transcription Target       Name:hsa_V$TAL1ALPHAE47_01       ID:DB_ID:1883
C=249; O=2; E=0.18; R=11.17; rawP=0.0138; adjP=0.0334
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000135525 NA MAP7 microtubule-associated protein 7 9053 ENSG00000135525
2  ENSG00000214050 NA FBXO16 F-box protein 16 157574 ENSG00000214050


Database:Transcription Target       Name:hsa_V$AREB6_01       ID:DB_ID:2078
C=267; O=2; E=0.19; R=10.42; rawP=0.0158; adjP=0.0334
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000135525 NA MAP7 microtubule-associated protein 7 9053 ENSG00000135525
2  ENSG00000163703 NA CRELD1 cysteine-rich with EGF-like domains 1 78987 ENSG00000163703


Database:Transcription Target       Name:hsa_GCANCTGNY_V$MYOD_Q6       ID:DB_ID:2435
C=913; O=4; E=0.66; R=6.10; rawP=0.0040; adjP=0.0334
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000135525 NA MAP7 microtubule-associated protein 7 9053 ENSG00000135525
2  ENSG00000124243 NA BCAS4 breast carcinoma amplified sequence 4 55653 ENSG00000124243
3  ENSG00000100478 NA AP4S1 adaptor-related protein complex 4, sigma 1 subunit 11154 ENSG00000100478
4  ENSG00000163703 NA CRELD1 cysteine-rich with EGF-like domains 1 78987 ENSG00000163703


Database:Transcription Target       Name:hsa_V$E12_Q6       ID:DB_ID:2206
C=260; O=2; E=0.19; R=10.70; rawP=0.0150; adjP=0.0334
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000135525 NA MAP7 microtubule-associated protein 7 9053 ENSG00000135525
2  ENSG00000163703 NA CRELD1 cysteine-rich with EGF-like domains 1 78987 ENSG00000163703


Database:Transcription Target       Name:hsa_V$RFX1_02       ID:DB_ID:2039
C=275; O=2; E=0.20; R=10.12; rawP=0.0167; adjP=0.0334
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000128581 NA RABL5 RAB, member RAS oncogene family-like 5 64792 ENSG00000128581
2  ENSG00000188010 NA MORN2 MORN repeat containing 2 729967 ENSG00000188010


Database:Transcription Target       Name:hsa_V$TTF1_Q6       ID:DB_ID:2270
C=261; O=2; E=0.19; R=10.66; rawP=0.0151; adjP=0.0334
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000100478 NA AP4S1 adaptor-related protein complex 4, sigma 1 subunit 11154 ENSG00000100478
2  ENSG00000170837 NA GPR27 G protein-coupled receptor 27 2850 ENSG00000170837


Database:Transcription Target       Name:hsa_V$MYOD_Q6       ID:DB_ID:1973
C=244; O=2; E=0.18; R=11.40; rawP=0.0133; adjP=0.0334
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000100478 NA AP4S1 adaptor-related protein complex 4, sigma 1 subunit 11154 ENSG00000100478
2  ENSG00000163703 NA CRELD1 cysteine-rich with EGF-like domains 1 78987 ENSG00000163703


Database:Transcription Target       Name:hsa_V$LMO2COM_01       ID:DB_ID:2034
C=260; O=2; E=0.19; R=10.70; rawP=0.0150; adjP=0.0334
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000135525 NA MAP7 microtubule-associated protein 7 9053 ENSG00000135525
2  ENSG00000163703 NA CRELD1 cysteine-rich with EGF-like domains 1 78987 ENSG00000163703


Database:Transcription Target       Name:hsa_TGGAAA_V$NFAT_Q4_01       ID:DB_ID:2437
C=1871; O=5; E=1.34; R=3.72; rawP=0.0101; adjP=0.0334
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000135525 NA MAP7 microtubule-associated protein 7 9053 ENSG00000135525
2  ENSG00000128581 NA RABL5 RAB, member RAS oncogene family-like 5 64792 ENSG00000128581
3  ENSG00000100478 NA AP4S1 adaptor-related protein complex 4, sigma 1 subunit 11154 ENSG00000100478
4  ENSG00000004864 NA SLC25A13 solute carrier family 25 (aspartate/glutamate carrier), member 13 10165 ENSG00000004864
5  ENSG00000114923 NA SLC4A3 solute carrier family 4, anion exchanger, member 3 6508 ENSG00000114923




WebGestalt is currently developed and maintained by Jing Wang and Bing Zhang at the Zhang Lab. Other people who have made significant contribution to the project include Dexter Duncan, Stefan Kirov, Zhiao Shi, and Jay Snoddy.

Funding credits: NIH/NIAAA (U01 AA016662, U01 AA013512); NIH/NIDA (P01 DA015027); NIH/NIMH (P50 MH078028, P50 MH096972); NIH/NCI (U24 CA159988); NIH/NIGMS (R01 GM088822).